U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX26444035: WGS of Stenotrophomonas bacterial culture
1 ILLUMINA (NextSeq 1000) run: 10.2M spots, 3G bases, 970.1Mb downloads

Design: NGS libraries were prepared using Illumina DNA prep. Sequencing was performed on the Illumina NextSeq instrument using the NextSeq 1000 P2 Reagents (300 Cycles) v3 kit.
Submitted by: Johns Hopkins University
Study: Long-read 16S rRNA NGS for identification of bacterial isolates
PRJNA1173255 • SRP539874 • All experiments • All runs
show Abstracthide Abstract
153 bacterial isolates were identified by ~500 bp Sanger sequencing and by long-read 16S rRNA Nanopore sequencing (Oxford Nanopore technologies). Isolates with discordant results between the two methods or unable to be identified underwent WGS on the Illumina NextSeq instrument using the NextSeq 1000/2000 P2 Reagents (300 Cycles) v3 kit (Illumina) to identify definitive taxa.
Sample:
SAMN44298508 • SRS22960136 • All experiments • All runs
Organism: Stenotrophomonas sp. 364
Library:
Name: B11130
Instrument: NextSeq 1000
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 10.2M spots, 3G bases, 970.1Mb
Run# of Spots# of BasesSizePublished
SRR3105964910,180,2653G970.1Mb2024-10-21

ID:
35731717

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On
  • Model organism or animal sample from Aepyceros melampus
    Model organism or animal sample from Aepyceros melampus
    biosample
  • Temperance
    Temperance
    Habitual moderation in the indulgence of a natural appetite, especially but not exclusively the consumption of alcohol.<br/>
    MeSH
  • Facial Muscles
    Facial Muscles
    Muscles of facial expression or mimetic muscles that include the numerous muscles supplied by the facial nerve that are attached to and move the skin of the face. (From Stedma...<br/>Year introduced: 1965
    MeSH
  • Presenteeism
    Presenteeism
    Reporting for work despite feeling ill.<br/>Year introduced: 2016
    MeSH

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...